PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj6g3v0227250.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family NAC
Protein Properties Length: 194aa    MW: 22669.2 Da    PI: 9.0434
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj6g3v0227250.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM90.13.9e-28171441128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                      l pG++F+Ptde lv++yLk++v +++l +  +i+++d++++ePw Lp    k    +e++++f+ +  +  +  +   r++ sg W+   k k
  Lj6g3v0227250.1  17 LLPGYKFDPTDEVLVNFYLKRRVFAQPLLF-YIIPDFDVFQTEPWGLPgGdgK--IfNERKCFFYNTMGRDIE--NIDIRVAGSGQWRVMEKGK 105
                      579************************888.78***************53333..236789999999999876..4789999******999999 PP

              NAM  91 evlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +vl   +++++g ++tL f++++   +++t+Wvmhe+rl
  Lj6g3v0227250.1 106 DVLIPqSNQVIGRRNTLNFWEEQGACARRTKWVMHEFRL 144
                      99887577789**************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.89E-3513163IPR003441NAC domain
PROSITE profilePS5100535.18817164IPR003441NAC domain
PfamPF023651.7E-1619144IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    Send to blast
MEDLIMTYVD EDGSVRLLPG YKFDPTDEVL VNFYLKRRVF AQPLLFYIIP DFDVFQTEPW  60
GLPGGDGKIF NERKCFFYNT MGRDIENIDI RVAGSGQWRV MEKGKDVLIP QSNQVIGRRN  120
TLNFWEEQGA CARRTKWVMH EFRLALIANP SKMANWAIYR IFKNKNAKKV NNMQEGVIRK  180
APMLVMPEVF DFNA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-2091699170NO APICAL MERISTEM PROTEIN
1ut4_B1e-2091699170NO APICAL MERISTEM PROTEIN
1ut7_A1e-2091699170NO APICAL MERISTEM PROTEIN
1ut7_B1e-2091699170NO APICAL MERISTEM PROTEIN
3swm_A1e-20916712171NAC domain-containing protein 19
3swm_B1e-20916712171NAC domain-containing protein 19
3swm_C1e-20916712171NAC domain-containing protein 19
3swm_D1e-20916712171NAC domain-containing protein 19
3swp_A1e-20916712171NAC domain-containing protein 19
3swp_B1e-20916712171NAC domain-containing protein 19
3swp_C1e-20916712171NAC domain-containing protein 19
3swp_D1e-20916712171NAC domain-containing protein 19
4dul_A1e-2091699170NAC domain-containing protein 19
4dul_B1e-2091699170NAC domain-containing protein 19
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF134131127
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.12e-31NAC domain containing protein 83